MapGeom

class gammapy.maps.MapGeom

Bases: object

Base class for WCS and HEALPix geometries.

Attributes Summary

center_coord
center_pix
center_skydir
is_allsky

Methods Summary

contains(coords)	Check if a given map coordinate is contained in the geometry.
contains_pix(pix)	Check if a given pixel coordinate is contained in the geometry.
coord_to_idx(coords[, clip])	Convert map coordinates to pixel indices.
coord_to_pix(coords)	Convert map coordinates to pixel coordinates.
coord_to_tuple(coord)	Generate a coordinate tuple compatible with this geometry.
crop(crop_width)	Crop the geometry at the edges.
downsample(factor)	Downsample the spatial dimension of the geometry by a given factor.
from_hdulist(hdulist[, hdu, hdu_bands])	Load a geometry object from a FITS HDUList.
get_coord([idx, flat])	Get the coordinate array for this geometry.
get_idx([idx, local, flat])	Get tuple of pixel indices for this geometry.
make_bands_hdu([hdu, hdu_skymap, conv])
pad(pad_width)	Pad the geometry at the edges.
pix_to_coord(pix)	Convert pixel coordinates to map coordinates.
pix_to_idx(pix[, clip])	Convert pixel coordinates to pixel indices.
read(filename, **kwargs)	Create a geometry object from a FITS file.
to_cube(axes)	Create a new geometry by appending a list of non-spatial axes to the present geometry.
to_image()	Create a 2D geometry by dropping all non-spatial dimensions of this geometry.
to_slice(slices[, drop_axes])	Create a new geometry by cutting in the non-spatial dimensions of this geometry.
upsample(factor)	Upsample the spatial dimension of the geometry by a given factor.

Attributes Documentation

center_coord

center_pix

center_skydir

is_allsky

Methods Documentation

contains(coords)

Check if a given map coordinate is contained in the geometry.

Parameters:

coords : tuple or MapCoord

Tuple of map coordinates.

Returns:

containment : ndarray

Bool array.

contains_pix(pix)

Check if a given pixel coordinate is contained in the geometry.

Parameters:

pix : tuple

Tuple of pixel coordinates.

Returns:

containment : ndarray

Bool array.

coord_to_idx(coords, clip=False)

Convert map coordinates to pixel indices.

Parameters:

coords : tuple or MapCoord

Coordinate values in each dimension of the map. This can either be a tuple of numpy arrays or a MapCoord object. If passed as a tuple then the ordering should be (longitude, latitude, c_0, …, c_N) where c_i is the coordinate vector for axis i.

clip : bool

Choose whether to clip indices to the valid range of the geometry. If false then indices for coordinates outside the geometry range will be set -1.

Returns:

pix : tuple

Tuple of pixel indices in image and band dimensions. Elements set to -1 correspond to coordinates outside the map.

coord_to_pix(coords)

Convert map coordinates to pixel coordinates.

Parameters:

coords : tuple

Coordinate values in each dimension of the map. This can either be a tuple of numpy arrays or a MapCoord object. If passed as a tuple then the ordering should be (longitude, latitude, c_0, …, c_N) where c_i is the coordinate vector for axis i.

Returns:

pix : tuple

Tuple of pixel coordinates in image and band dimensions.

coord_to_tuple(coord)

Generate a coordinate tuple compatible with this geometry.

Parameters:coord : MapCoord

crop(crop_width)

Crop the geometry at the edges.

Parameters:

crop_width : {sequence, array_like, int}

Number of values cropped from the edges of each axis.

Returns:

geom : MapGeom

Cropped geometry.

downsample(factor)

Downsample the spatial dimension of the geometry by a given factor.

Parameters:

factor : int

Downsampling factor.

Returns:

geom : MapGeom

Downsampled geometry.

classmethod from_hdulist(hdulist, hdu=None, hdu_bands=None)

Load a geometry object from a FITS HDUList.

Parameters:

hdulist : HDUList

HDU list containing HDUs for map data and bands.

hdu : str

Name or index of the HDU with the map data.

hdu_bands : str

Name or index of the HDU with the BANDS table. If not defined this will be inferred from the FITS header of the map HDU.

Returns:

geom : MapGeom

Geometry object.

get_coord(idx=None, flat=False)

Get the coordinate array for this geometry.

Returns a coordinate array with the same shape as the data array. Pixels outside the geometry are set to NaN. Coordinates for a single image plane can be accessed by setting idx to the index tuple of a plane.

Parameters:

idx : tuple, optional

A tuple of indices with one index for each non-spatial dimension. If defined only coordinates for the image plane with this index will be returned. If none then coordinates for all pixels will be returned.

flat : bool, optional

Return a flattened array containing only coordinates for pixels contained in the geometry.

Returns:

coords : tuple

Tuple of coordinate vectors with one vector for each dimension.

get_idx(idx=None, local=False, flat=False)

Get tuple of pixel indices for this geometry.

Returns all pixels in the geometry by default. Pixel indices for a single image plane can be accessed by setting idx to the index tuple of a plane.

Parameters:

idx : tuple, optional

A tuple of indices with one index for each non-spatial dimension. If defined only pixels for the image plane with this index will be returned. If none then all pixels will be returned.

local : bool

Flag to return local or global pixel indices. Local indices run from 0 to the number of pixels in a given image plane.

flat : bool, optional

Return a flattened array containing only indices for pixels contained in the geometry.

Returns:

idx : tuple

Tuple of pixel index vectors with one vector for each dimension.

make_bands_hdu(hdu=None, hdu_skymap=None, conv=None)

pad(pad_width)

Pad the geometry at the edges.

Parameters:

pad_width : {sequence, array_like, int}

Number of values padded to the edges of each axis.

Returns:

geom : MapGeom

Padded geometry.

pix_to_coord(pix)

Convert pixel coordinates to map coordinates.

Parameters:

pix : tuple

Tuple of pixel coordinates.

Returns:

coords : tuple

Tuple of map coordinates.

pix_to_idx(pix, clip=False)

Convert pixel coordinates to pixel indices. Returns -1 for pixel coordinates that lie outside of the map.

Parameters:

pix : tuple

Tuple of pixel coordinates.

clip : bool

Choose whether to clip indices to the valid range of the geometry. If false then indices for coordinates outside the geometry range will be set -1.

Returns:

idx : tuple

Tuple of pixel indices.

classmethod read(filename, **kwargs)

Create a geometry object from a FITS file.

Parameters:

filename : str

Name of the FITS file.

hdu : str

Name or index of the HDU with the map data.

hdu_bands : str

Name or index of the HDU with the BANDS table. If not defined this will be inferred from the FITS header of the map HDU.

Returns:

geom : MapGeom

Geometry object.

to_cube(axes)

Create a new geometry by appending a list of non-spatial axes to the present geometry. This will result in a new geometry with N+M dimensions where N is the number of current dimensions and M is the number of axes in the list.

Parameters:

axes : list

Axes that will be appended to this geometry.

Returns:

geom : MapGeom

Map geometry.

to_image()

Create a 2D geometry by dropping all non-spatial dimensions of this geometry.

Returns:

geom : MapGeom

Image geometry.

to_slice(slices, drop_axes=True)

Create a new geometry by cutting in the non-spatial dimensions of this geometry.

Parameters:

slices : tuple

Tuple of integers or slice objects. Contains one element for each non-spatial dimension.

drop_axes : bool

Drop axes for which the slice reduces the size of that dimension to one.

Returns:

geom : MapGeom

Sliced geometry.

upsample(factor)

Upsample the spatial dimension of the geometry by a given factor.

Parameters:

factor : int

Upsampling factor.

Returns:

geom : MapGeom

Upsampled geometry.