SpectrumExtraction¶
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class
gammapy.spectrum.
SpectrumExtraction
(observations, bkg_estimate, e_reco=None, e_true=None, containment_correction=False, max_alpha=1, use_recommended_erange=True)[source]¶ Bases:
object
Creating input data to 1D spectrum fitting.
This class is responsible for extracting a
SpectrumObservation
from aDataStoreObservation
. The background estimation is done beforehand, using e.g. theReflectedRegionsBackgroundEstimator
. For point sources analyzed with ‘full containment’ IRFs, a correction for PSF leakage out of the circular ON region can be applied.For more info see Spectral Fitting.
For a usage example see spectrum_analysis.html
Parameters: observations :
Observations
Observations to process
bkg_estimate :
BackgroundEstimate
Background estimate, e.g. of
ReflectedRegionsBackgroundEstimator
e_reco :
Quantity
, optionalReconstructed energy binning
e_true :
Quantity
, optionalTrue energy binning
containment_correction : bool
Apply containment correction for point sources and circular on regions.
max_alpha : float
Maximum alpha value to accept, if the background was estimated using reflected regions this is 1 / minimum number of regions.
use_recommended_erange : bool
Extract spectrum only within the recommended valid energy range of the effective area table (default is True).
Attributes Summary
DEFAULT_RECO_ENERGY
Reconstruced energy axis to be used if not specified otherwise DEFAULT_TRUE_ENERGY
True energy axis to be used if not specified otherwise Methods Summary
apply_containment_correction
(observation, bkg)Apply PSF containment correction. compute_energy_threshold
(**kwargs)Compute and set the safe energy threshold for all observations. extract_counts
(bkg)Fill on and off vector for one observation. extract_irfs
(observation)Extract IRFs. make_empty_vectors
(observation, bkg)Create empty vectors. process
(observation, bkg)Process one observation. run
()Run all steps. write
(outdir[, ogipdir, use_sherpa, overwrite])Write results to disk. Attributes Documentation
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DEFAULT_RECO_ENERGY
= <Quantity [1.00000000e-02, 1.13646367e-02, 1.29154967e-02, 1.46779927e-02, 1.66810054e-02, 1.89573565e-02, 2.15443469e-02, 2.44843675e-02, 2.78255940e-02, 3.16227766e-02, 3.59381366e-02, 4.08423865e-02, 4.64158883e-02, 5.27499706e-02, 5.99484250e-02, 6.81292069e-02, 7.74263683e-02, 8.79922544e-02, 1.00000000e-01, 1.13646367e-01, 1.29154967e-01, 1.46779927e-01, 1.66810054e-01, 1.89573565e-01, 2.15443469e-01, 2.44843675e-01, 2.78255940e-01, 3.16227766e-01, 3.59381366e-01, 4.08423865e-01, 4.64158883e-01, 5.27499706e-01, 5.99484250e-01, 6.81292069e-01, 7.74263683e-01, 8.79922544e-01, 1.00000000e+00, 1.13646367e+00, 1.29154967e+00, 1.46779927e+00, 1.66810054e+00, 1.89573565e+00, 2.15443469e+00, 2.44843675e+00, 2.78255940e+00, 3.16227766e+00, 3.59381366e+00, 4.08423865e+00, 4.64158883e+00, 5.27499706e+00, 5.99484250e+00, 6.81292069e+00, 7.74263683e+00, 8.79922544e+00, 1.00000000e+01, 1.13646367e+01, 1.29154967e+01, 1.46779927e+01, 1.66810054e+01, 1.89573565e+01, 2.15443469e+01, 2.44843675e+01, 2.78255940e+01, 3.16227766e+01, 3.59381366e+01, 4.08423865e+01, 4.64158883e+01, 5.27499706e+01, 5.99484250e+01, 6.81292069e+01, 7.74263683e+01, 8.79922544e+01, 1.00000000e+02] TeV>¶ Reconstruced energy axis to be used if not specified otherwise
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DEFAULT_TRUE_ENERGY
= <Quantity [1.00000000e-02, 1.10069417e-02, 1.21152766e-02, 1.33352143e-02, 1.46779927e-02, 1.61559810e-02, 1.77827941e-02, 1.95734178e-02, 2.15443469e-02, 2.37137371e-02, 2.61015722e-02, 2.87298483e-02, 3.16227766e-02, 3.48070059e-02, 3.83118685e-02, 4.21696503e-02, 4.64158883e-02, 5.10896977e-02, 5.62341325e-02, 6.18965819e-02, 6.81292069e-02, 7.49894209e-02, 8.25404185e-02, 9.08517576e-02, 1.00000000e-01, 1.10069417e-01, 1.21152766e-01, 1.33352143e-01, 1.46779927e-01, 1.61559810e-01, 1.77827941e-01, 1.95734178e-01, 2.15443469e-01, 2.37137371e-01, 2.61015722e-01, 2.87298483e-01, 3.16227766e-01, 3.48070059e-01, 3.83118685e-01, 4.21696503e-01, 4.64158883e-01, 5.10896977e-01, 5.62341325e-01, 6.18965819e-01, 6.81292069e-01, 7.49894209e-01, 8.25404185e-01, 9.08517576e-01, 1.00000000e+00, 1.10069417e+00, 1.21152766e+00, 1.33352143e+00, 1.46779927e+00, 1.61559810e+00, 1.77827941e+00, 1.95734178e+00, 2.15443469e+00, 2.37137371e+00, 2.61015722e+00, 2.87298483e+00, 3.16227766e+00, 3.48070059e+00, 3.83118685e+00, 4.21696503e+00, 4.64158883e+00, 5.10896977e+00, 5.62341325e+00, 6.18965819e+00, 6.81292069e+00, 7.49894209e+00, 8.25404185e+00, 9.08517576e+00, 1.00000000e+01, 1.10069417e+01, 1.21152766e+01, 1.33352143e+01, 1.46779927e+01, 1.61559810e+01, 1.77827941e+01, 1.95734178e+01, 2.15443469e+01, 2.37137371e+01, 2.61015722e+01, 2.87298483e+01, 3.16227766e+01, 3.48070059e+01, 3.83118685e+01, 4.21696503e+01, 4.64158883e+01, 5.10896977e+01, 5.62341325e+01, 6.18965819e+01, 6.81292069e+01, 7.49894209e+01, 8.25404185e+01, 9.08517576e+01, 1.00000000e+02, 1.10069417e+02, 1.21152766e+02, 1.33352143e+02, 1.46779927e+02, 1.61559810e+02, 1.77827941e+02, 1.95734178e+02, 2.15443469e+02, 2.37137371e+02, 2.61015722e+02, 2.87298483e+02, 3.16227766e+02] TeV>¶ True energy axis to be used if not specified otherwise
Methods Documentation
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apply_containment_correction
(observation, bkg)[source]¶ Apply PSF containment correction.
Parameters: observation :
DataStoreObservation
observation
bkg :
BackgroundEstimate
background esimate
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compute_energy_threshold
(**kwargs)[source]¶ Compute and set the safe energy threshold for all observations.
See
SpectrumObservation.compute_energy_threshold
for full documentation about the options.
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extract_counts
(bkg)[source]¶ Fill on and off vector for one observation.
Parameters: bkg :
BackgroundEstimate
Background estimate
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extract_irfs
(observation)[source]¶ Extract IRFs.
Parameters: observation :
DataStoreObservation
Observation
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make_empty_vectors
(observation, bkg)[source]¶ Create empty vectors.
This method copies over all meta info and sets up the energy binning.
Parameters: observation :
DataStoreObservation
Observation
bkg :
BackgroundEstimate
Background estimate
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process
(observation, bkg)[source]¶ Process one observation.
Parameters: observation :
DataStoreObservation
Observation
bkg :
BackgroundEstimate
Background estimate
Returns: spectrum_observation :
SpectrumObservation
Spectrum observation
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write
(outdir, ogipdir='ogip_data', use_sherpa=False, overwrite=False)[source]¶ Write results to disk.
Parameters: outdir :
Path
Output folder
ogipdir : str, optional
Folder name for OGIP data, default: ‘ogip_data’
use_sherpa : bool, optional
Write Sherpa compliant files?
overwrite : bool
Overwrite existing files?
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